The DNA double helix, although stabilised by hydrogen bonding, can be denatured by heat. This occurs at characteristic temperature called denaturation temperature or melting temperature Tm.

Tm is defined as the temperature at which the helical structure of DNA is lost.

Since G—C base pairs are more stable than A-T base pairs, the Tm is greater for DNAs with higher G—C content. Thus, the Tm is 650°C → 65°C for 35% G—C content, while it is 700°C → 70°C for 50% G—C content. Formamide destabilises hydrogen bonds and, therefore, lowers Tm.


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